Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015864383.1_cds_XP_016515980.1_28267
CDS Infomation

[gene=LOC107832632] [db_xref=GeneID:107832632] [protein=pollen receptor-like kinase 1 isoform X2] [protein_id=XP_016515980.1] [location=join(137615..138248,138976..139611,140185..140410,140451..140877)] [gbkey=CDS]
Sequence

ATGGCACAAACTACACAAAAAAACTACAAAATCAAAAACAAAAAACATCTTCCCTTCCTC
TTCGTTATCGCGTTTTTACTAGCATTTGTCACCACCCCATCAGAGGGGAAATTATCAGAA
GCTGAGATTCTGCTCAAGTTTAGTCAATCTTTAAAATATGATGGCAACCCCTTTTCAACT
TGGAATGCCAATGTACCACCTTGCGTCAAAGGGAATAATAAGCCTAATTGGAATAGTCTT
TTTTGTGAAGGTGGTATGGTTTATGGTTTGAATCTTGAAAATCTTGGTTTAAGTGGTACC
CTTGATGTGGACACGTTAAAAGAGCTGCCTAATTTGAGGACCATAAGTGTATTGAGTAAT
AATTTTGAAGGGTCTTTGCCACCTTTGAATAAACTAACTGCATTAAAAAGTGCTTATTTT
TCAAACAATAAATTCTCTGGGCCAATTGATGGCAAGACTTTTGAAGGGATGAATTCGTTA
AAGAAGCTTCACCTAGCAAATAATCAATTTACAGGACAACTCCCTCCCATATTCGGTGAA
TTGCCAAAGCTCGTGGAGTTGAATGTACAAAATAATAAGTTTGAGGGTCCAATTCCTTCT
TCCCTTTCTCGTCTATATTTTTCTGCTTTTCAAGGAAATGATGGTCTATGTGGTCCACCT
TTAACAAAATCATGCAATGAAGAGGCACCAAAAAAGCAAGAATCATCTTCTGTTTGGAAG
ATTGCCCTTATCGTCGTGGTGGTTGTTGCAGTTATAGGTCTAATTGCCATTGTACTCATA
ACTCGTCGCAAGAAAAATAATTCCCAACGGGAAGTTACTCTAGGATCATCAAATTTATCA
CCAACAACTCATGAACCAAAACTCGCTTCAGTTGATCTAAACAAAATGGAACAAGGCCAA
GCTGCTGCATCTCCTGATCGTTCCAACGATGGCAAAAGAGCTGAACAAGGACAAAAGCTT
TTGTTCTTGAAAGATGACATTGAGAAATTTGACTTGCCAGATTTATTAAAGGCCTCAGCT
GAAGTATTGGGCAGTGGTGTGTTTGGTTCAACTTATAAAGCTGCACTTAGCACTGGTCCT
GTTATGGTTGTTAAGAGGTTTAGACATATGAATAAAGTCGGTAAGGAAGACTTCCATGAG
CATATGAGAAGACTTGGCAGATTGAGTCATAAGAACTTGCTTCCTGTTCTGGCTTTCTAC
TATAGGAAAGAGGAGAAACTTCTGGTCTTTGAATACGTAAACAATGTCAGCCTTGCCGTT
TATCTTCATGGCAATAGCAAATCACGTGGGAACCAAAGCTTGGATTGGCCAACTCGTTTG
AAAATTGTAAAAGGCGTAGCCAAAGGAGTTTTGTACCTCTACAATGAGCTACCAAGCTTA
ACTGCACCTCATGGTCACCTCAAGTCCTCAAATGTCCTTCTAACTGAAACCTTTGAGCCA
GTTCTCACAGATTACGCCTTACTACCAGTCGTAAATATCGAACATGCTCAAGAACATATG
ATCTCATACAAAGCACCAGAGTACAAGCAATCTGGCAAAATCAACAGGAAAACTGATGTT
TGGACACTTGGTATGTTGATCCTAGAAATCTTGACTGGGAAATTTCCTTCAAATCTTTTA
GGCAAGGGGAGTCATGACACCGATGATTTGGCGAGTTGGGTAAACTCTGTTCTTGGAGAG
GATTCATCAAAAGAAGAGGTGTTTGATAAGGAAATGAAAGGAACACAAGATTGTGAGGGT
GAAATGATGAAGCTTTTGAAGGTTGGTTTGAGTTGTTGTGAGGCTGATGTGGAGAAAAGA
TGGGATATAAAAGAGGCTGTGGAGAAAATTGAGGAAGTAAAAGAGAAAGGTGCTGCAGGG
GATGGTGATTTCTTCTCCTCTGTTGATGCAAGTGATGAAACTGACATGCATAATTCAAGA
TGA

Peptide Sequence

PEP ID

XP_016515980.1
PEP Infomation

PREDICTED: pollen receptor-like kinase 1 isoform X2 [Nicotiana tabacum]
Sequence

MAQTTQKNYKIKNKKHLPFLFVIAFLLAFVTTPSEGKLSEAEILLKFSQSLKYDGNPFST
WNANVPPCVKGNNKPNWNSLFCEGGMVYGLNLENLGLSGTLDVDTLKELPNLRTISVLSN
NFEGSLPPLNKLTALKSAYFSNNKFSGPIDGKTFEGMNSLKKLHLANNQFTGQLPPIFGE
LPKLVELNVQNNKFEGPIPSSLSRLYFSAFQGNDGLCGPPLTKSCNEEAPKKQESSSVWK
IALIVVVVVAVIGLIAIVLITRRKKNNSQREVTLGSSNLSPTTHEPKLASVDLNKMEQGQ
AAASPDRSNDGKRAEQGQKLLFLKDDIEKFDLPDLLKASAEVLGSGVFGSTYKAALSTGP
VMVVKRFRHMNKVGKEDFHEHMRRLGRLSHKNLLPVLAFYYRKEEKLLVFEYVNNVSLAV
YLHGNSKSRGNQSLDWPTRLKIVKGVAKGVLYLYNELPSLTAPHGHLKSSNVLLTETFEP
VLTDYALLPVVNIEHAQEHMISYKAPEYKQSGKINRKTDVWTLGMLILEILTGKFPSNLL
GKGSHDTDDLASWVNSVLGEDSSKEEVFDKEMKGTQDCEGEMMKLLKVGLSCCEADVEKR
WDIKEAVEKIEEVKEKGAAGDGDFFSSVDASDETDMHNSR

Transcript Sequence

Gene sequence data has not been registered.